Rename doc/manual{src -> source}

This is needed to avoid this
https://github.com/mesonbuild/meson/issues/13774 when we go back to
making our subproject directory `src`.

doc/manual/source/command-ref/files/manifest.json.md

@@ -0,0 +1,45 @@
+## `manifest.json`
+
+The manifest file records the provenance of the packages that are installed in a [profile](./profiles.md) managed by [`nix profile`](@docroot@/command-ref/new-cli/nix3-profile.md) (experimental).
+
+Here is an example of what the file might look like after installing `zoom-us` from Nixpkgs:
+
+```json
+{
+  "version": 1,
+  "elements": [
+    {
+      "active": true,
+      "attrPath": "legacyPackages.x86_64-linux.zoom-us",
+      "originalUrl": "flake:nixpkgs",
+      "storePaths": [
+        "/nix/store/wbhg2ga8f3h87s9h5k0slxk0m81m4cxl-zoom-us-5.3.469451.0927"
+      ],
+      "uri": "github:NixOS/nixpkgs/13d0c311e3ae923a00f734b43fd1d35b47d8943a"
+    },
+    …
+  ]
+}
+```
+
+Each object in the array `elements` denotes an installed package and
+has the following fields:
+
+* `originalUrl`: The [flake reference](@docroot@/command-ref/new-cli/nix3-flake.md) specified by
+  the user at the time of installation (e.g. `nixpkgs`). This is also
+  the flake reference that will be used by `nix profile upgrade`.
+
+* `uri`: The locked flake reference to which `originalUrl` resolved.
+
+* `attrPath`: The flake output attribute that provided this
+  package. Note that this is not necessarily the attribute that the
+  user specified, but the one resulting from applying the default
+  attribute paths and prefixes; for instance, `hello` might resolve to
+  `packages.x86_64-linux.hello` and the empty string to
+  `packages.x86_64-linux.default`.
+
+* `storePath`: The paths in the Nix store containing the package.
+
+* `active`: Whether the profile contains symlinks to the files of this
+  package. If set to false, the package is kept in the Nix store, but
+  is not "visible" in the profile's symlink tree.